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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934159.1_cds_XP_016480307.1_71755
CDS Infomation

[gene=LOC107801489] [db_xref=GeneID:107801489] [protein=alpha-galactosidase 1-like] [protein_id=XP_016480307.1] [location=join(6253..6461,7394..7452,7579..7635,7892..7926,8033..8136,8227..8302,8387..8445,8550..8615,8706..8789,8866..8930,9251..9333,9435..9525,9657..9706,9794..9958)] [gbkey=CDS]
Sequence

ATGGAGATAAGAGTAGGGACAAAGTTACTATTACTTGCATTATGCTTATTGATATCCGCC
GTGATTGGTGGTTACTGCCACCGTCTGACGGCGGATATGCGGTGGCAAGTTTTGAACCGA
AGGCAGCAGCAAAATGAGAAAGTGGATTCAGTTGACAGTACTCGACGTAATTTGCTCTCC
AATGGACTCGGCTTGACTCCTCCTATGGGGTGGAGTAGTTGGAATCATTTTGGCTGCAAC
ATTGATGAGAAAGTCATAAGAGAAACTGCTGATGCCTTGGTTTCAACTGGTCTTGATAAG
CTGGGATATAAATATGTCAATATCGATGACTGCTGGGCGGAATCTCAACGTGATGATCAG
GGAAATTTTGCACCTAAAAAGTCCACATTTCCTTCTGGAATGAAAGCTCTAGCTGACTAT
GTTCACAGTAAAGGTCTTAAGCTAGGAATCTACTCAGACGCAGGGTATTTTACTTGCAGC
AAGAAAATGCCTGGTTCACTTGGTCATGAGGAACAAGATGCAAAAACTTTTGCAGCATGG
GGTATTGATTATTTGAAGTATGATAATTGCAACCATGATGGAACAAAGCCAACTGTGCGA
TATCCTGTAATGACAAGAGCTCTAATGAGTGCTGGACGACCTATCTTCTTTAGTCTTTGT
GAATGGGGCGACTTGCATCCGGCATTGTGGGGTGGCAAAGTAGGTAATAGCTGGAGAAAC
ACAAACGATATCACTGATACATGGGAAAGCATGATTTCTAGAGCAGACCAGAATGAAGTT
TATGCAGAACTTGCAAGGCCTGGTGGCTGGAATGATCCCGACATGCTTGAGGTGGGAAAT
GGAGGTATGACAAAGGATGAATACATTGTCCACTTTAGTCTCTGGGTGATTTCAAAGGCT
CCCCTTATCATCGGTTGTGATGTGAGAAACTTATCAAATGATACCAAAGAAATACTTGAC
AACAAGGAGGTCATTGCTGTAAACCAAGATGAATTAGGCGTCCAGGGCAAAAAGGTCAGA
ATGGAAGGCGATATTGAGGTCTGGGCAGGGCCTTTATCAGGCTATAGAGTAGCTTTAGTG
CTTCTCAACCGTGGTCCTCAGAAATATGAAATAACAGCACACTGGGATGACATTGGAATC
CCTCCTAACAGCGTCGTAGAGGCAAGAGATCTTTGGGAGGTATGTCTTTGTTACATTTCC
TAA

Peptide Sequence

PEP ID

XP_016480307.1
PEP Infomation

PREDICTED: alpha-galactosidase 1-like [Nicotiana tabacum]
Sequence

MEIRVGTKLLLLALCLLISAVIGGYCHRLTADMRWQVLNRRQQQNEKVDSVDSTRRNLLS
NGLGLTPPMGWSSWNHFGCNIDEKVIRETADALVSTGLDKLGYKYVNIDDCWAESQRDDQ
GNFAPKKSTFPSGMKALADYVHSKGLKLGIYSDAGYFTCSKKMPGSLGHEEQDAKTFAAW
GIDYLKYDNCNHDGTKPTVRYPVMTRALMSAGRPIFFSLCEWGDLHPALWGGKVGNSWRN
TNDITDTWESMISRADQNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSLWVISKA
PLIIGCDVRNLSNDTKEILDNKEVIAVNQDELGVQGKKVRMEGDIEVWAGPLSGYRVALV
LLNRGPQKYEITAHWDDIGIPPNSVVEARDLWEVCLCYIS

Transcript Sequence

Gene sequence data has not been registered.